Supervised Theses
2025
Investigating the significance of α-interface hot spots on K-Ras homodimer formation
Çakır, B. İ.
Middle East Technical University, MSc, Biology
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2024
The role of G-domain on K-Ras and Gα dimerization
Aydın, İ.
Middle East Technical University, MSc, Genetics
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2023
Investigating the homo-dimerization of ADGRD1/GPR133 and ADGRG5/GPR114 via resonance energy transfer techniques
Demirbaş, B.
Middle East Technical University, MSc, Biochemistry, Biology
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Detection of the homo-oligomerization of ADGRE2/EMR2 using BRET and FRET
Öğütçü, D.
Middle East Technical University, MSc, Biology
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2022
Fluorescent labeling of SPOCK1 and localization studies in live neural cell lines
Karaboğa, Z. D.
Middle East Technical University, MSc, Biology
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Development of a composite guide for peripheral nerve regeneration
Arslantunalı, D.
Middle East Technical University, PhD, Bioengineering, Biotechnology
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The effect of topography-induced mechanotransduction on expression levels of focal adhesion-related genes in neuro-2A cells
Culfa, Ş.
Middle East Technical University, MSc, Biology, Biophysics, Biochemistry
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The effect of BFPP mutations on trafficking, signaling and function of ADGRG1/GPR56 receptor
Demir, N.
Middle East Technical University, MSc, Biology
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Investigation of the effect of GPCR oligomerization on the GNAI1 homodimerization in live cells using FRET
Nallı, E.
Middle East Technical University, MSc, Biotechnology
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2021
Aptamer selection against cadaverine/lysine antiporter (CADB) purified in mild detergent
Kara, N.
Middle East Technical University, MSc, Biochemistry
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Systematic evolution of novel 2′F-PY RNA aptamers targeting the membrane protein l-arginine/agmatine antiporter purified in mild detergent
Ayoub, N. F. N.
Middle East Technical University, MSc, Biochemistry
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A brighter method to illuminate the dark side of adhesion g protein-coupled receptors: detection of the ADGRG1 dimers by bioluminescence resonance energy transfer (BRET)
Murat, M.
Middle East Technical University, MSc, Biology
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Investigation of physical interaction between gαi and gαs proteins via FRET in live cells
Balkan, S. T.
Middle East Technical University, MSc, Biology, Biochemistry
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Phosphorylation independent activation of beta arrestin 2 and beta adrenoceptor type 2 by means of small molecules
Akyol, A.
Middle East Technical University, MSc, Biochemistry
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2020
Behavior of neuro-2a cells on femtosecond laser structured silicon substrates
Mingu, S.
Middle East Technical University, MSc, Biology, Biophysics
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2019
Analysis of interactions between beta-2 adrenergic receptor & beta arrestin-2 using förster resonance energy transfer (fret) method in live cells
Evci, H.
Middle East Technical University, MSc, Biology, Biochemistry, Genetics
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Prediction of transmembrane regions of g protein-coupled receptors using machine learning techniques
Çınar, M. Ç.
Middle East Technical University, MSc, Biology, Genetics
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Investigation of gαi1 protein homodimerization in live cells using förster resonance energy transfer (FRET) and bimolecular fluorescence complementation assay (BiFC)
Atay, Ö.
Middle East Technical University, MSc, Biochemistry
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2018
Visualization of interactions between fluorescently tagged G protein α11, α12/13 subtypes and adenosine 2A, dopamine 2 or homodimer adenosine 2A/2A receptors
Kostromin, I. B.
Middle East Technical University, MSc, Biology
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Nucleic acid gated nanopore delivery of antibiotics
Kavruk, M.
Middle East Technical University, PhD, Biotechnology, Microbiology
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Nucleic acid based in-vitro diagnostic device
Balcı, O.
Middle East Technical University, PhD, Biotechnology
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Molecular investigation of therapeutical effects of ɣ-tocotrienol conjugation therapy with doxorubicin on hepatocellular carcinoma cell line HEPG2
Özyurt, İ.
Middle East Technical University, MSc, Biology, Biochemistry, Biophysics
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2016
Optimization of internal tagging of inhibitory G-proteins for investigating their interactions with dopamine receptor D2 via fret method
Özcan, G.
Middle East Technical University, MSc, Biology, Biochemistry, Biotechnology
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2015
More than just a dimer: detection of g protein-coupled receptor oligomers using fluorescent protein reassembly of Ste2p, a yeast pheromone receptor
Cevheroğlu, O.
Middle East Technical University PhD, Biophysics, Biochemistry, Biotechnology
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2014
Design and characterization of 5-L autoclavable batch-culture bioreactor
Ünsal Beyge, Ş.
Middle East Technical University, MSc, Biotechnology
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In vivo detection of GPCR dimerizations in Saccharomyces cerevisiae using FRET and BiFC
Üstünkaya, B.
Middle East Technical University, MSc, Biology
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In vivo detection of yeast alpha mating pheromone receptor Ste2p homodimerization by FRET
Bulut, G.
Middle East Technical University, MSc, Biology
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Identifying the putative G protein coupled receptor/s candidates of cocaine and amphetamine regulated transcript (CART) peptide
Kasap, M.
Middle East Technical University, MSc, Biology, Genetics
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Detection of homo/hetero-dimerizations between adenosine A2A, dopamine D2 and NMDA receptors by use of FRET and BiFC assays
Çelebiöven, S.
Middle East Technical University, MSc, Biology
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In vivo detection of GPCR dimerizations in Saccharomyces cerevisiae using FRET and BiFC
Üntünkaya, B.
Middle East Technical University, MSc, Biology
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2013
Labeling and optimization of organelle marker for co-localization with yeast GPCR dimers
Süder, İ.
Middle East Technical University, MSc, Biology, Biotechnology
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Comparison of fluorescent protein labelled and wild type NMDA receptor distribution
Prinçci, Ş. Ş.
Middle East Technical University, MSc, Biology
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The functional assessment of fluorecently tagged adenosine a2a and dopamine D2 receptors and qualitative analysis of dimerization of adenosine A2A and dopamine D2 receptor by using fret
Akkuzu, S.
Middle East Technical University, MSc, Biology
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2012
Detecting g-protein coupled receptor interactions using enhanced green fluorescent protein reassembly
Kumaş, G.
Middle East Technical University, MSc, Biology, Biotechnology, Biochemistry
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2011
Optimization o fret method to detect dimerization of dopamin D2 and adenosine A2A receptors in live cells
Ünlü, G.
Middle East Technical University, MSc, Biology
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Co-Advised Theses
2025
NIR-responsive silicon-rhodamine based photosensitizer: A promising approach for glioblastoma treatment
Özoğul, N.
Middle East Technical University, MSc, Chemistry, Biochemistry
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2022
Development of SERS-active silver nanowire filter foils for pathogen detection in fluids
Oğuz, H.
Middle East Technical University, MSc, Physics and Physics Engineering
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2021
Comparative transcriptome analyses of a standard strain and clavulanic acid overproducing industrial strain of s. Clavuligerus
Çelik, G.
Middle East Technical University, MSc, Biology, Biotechnology
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2019
Expression of genes encoding fundamental copper homeostasis proteins in copper resistant Escherichia coli mutants
Uyanık, T.
Middle East Technical University, MSc, Biotechnology, Genetics, Microbiology
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Expression of the genes encoding important transport system proteins in silver resistant Escherichia coli mutants
Uyanık, G.
Middle East Technical University, MSc, Biotechnology, Genetics, Microbiology
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Investigating the effect of different factors on enzymatic hydrolysis of sugar beet pulp & corn cob
Yurtseven, B. L.
Middle East Technical University, MSc, Biotechnology
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Analysis of candidate cocaine and amphetamine regulated transcript (CART) genes: Changes in erk phosphorylation in N2A cells
Özkılıç, A.
Middle East Technical University, MSc, Endocrinology and Metabolic Diseases, Genetics, Neurology
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Analyses and modeling of ovarian cancer microarray data
Karakelle, B. S.
Middle East Technical University, MSc, Biostatistics
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2016
Pectinase production using apple pomace as carbon source by mixed culture fermentation
Kuvvet, C.
Middle East Technical University, MSc, Biotechnology, Food Engineering, Microbiology
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2015
Thermostabilization of Panomycocin, a novel exo-beta-1,3-glucanase isolated from Pichia anomala NCYC 434, by using excipients and computational methods
Muhammed, M. T.
Middle East Technical University, MSc, Bioengineering
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